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Changelog

Source: NEWS.md

medfateland 2.7.0

  • Runoff-runon dynamics coupled to local water balance in TETIS
  • PET is now stored in watershed-level results
  • New functions for plotting watershed-level simulation results
  • New channel routing algorithm (variable velocity) suggested by Maria Gonzalez-Sanchis

medfateland 2.6.1

  • Bug correction: subwatershed mergin in spwb_land
  • Correction of tree density using maps of aboveground tree biomass
  • Option simplify in function initialize_landscape() replaced by reduce_to_dominant, merge_trees and merge_shrubs

medfateland 2.6.0

CRAN release: 2025-04-23

  • *_land() functions can process subwatersheds
  • parallelization in *_land() for subwatersheds

medfateland 2.5.3

  • new function optimization_rock()
  • channel cells are now forced to be outlet in *_land simulations
  • channel routing via outlet backlog implemented

medfateland 2.5.2

  • information on soil domain and transpiration mode of initialized landscapes
  • overland routing available in new function overland_routing()
  • overland flow allowed in completely flat areas (according to processing order)
  • bug correction: management in fordyn_land()

medfateland 2.5.1

CRAN release: 2025-01-28

  • id mapping existence checked in add_forests
  • overland routing exported in spwb_land

medfateland 2.5.0

  • Compliance with medfate 4.8.0: internal communication structures
  • Bug correction: input column regen is no longer kept in parse_forestable()

medfateland 2.4.6

CRAN release: 2024-10-03

  • Numerical species codes allowed as input for fordyn_land()
  • Added filterMissingSpecies in parse_forestable()
  • Added keepUnfilteredCopy in parse_forestable()
  • Revision of input checks

medfateland 2.4.5

CRAN release: 2024-07-24

  • New helper function parse_forestable()
  • Soil domains set to “single” by default

medfateland 2.4.4

  • Improvements in modify_forest_structure()

medfateland 2.4.3

CRAN release: 2024-06-02

  • Revision fordyn_scenario vs dispersal
  • Version submitted to CRAN

medfateland 2.4.2

  • New control parameters for dispersal

medfateland 2.4.1

  • Compliance with medfate v. 4.3.1
  • New helper function add_forests() to parse forest plot data tables
  • New option simplify in function initialize_landscape()
  • Submission to CRAN

medfateland 2.4.0

  • Compliance with medfate v. 4.3.0
  • New watershed parameters n_interflow, n_baseflow
  • Daily substeps allowed in interflow calculations

medfateland 2.3.0

  • Infiltration and runoff in non-soil cells
  • Helper functions to create landscape sf objects
  • Loss to a deeper aquifer implemented

medfateland 2.2.1

  • Weather aggregation for interpolation
  • New functions spwb_land_day and spwb_growth_day

medfateland 2.2.0

  • Compliance with medfate ver. 4.1.0
  • spwb_land revisited (tetis)
  • rasterized maps using tidyterra

medfateland 2.1.1

  • Removing the need to define ‘channel’
  • Input sf can contain column ‘local_control’ to override control for specific cells/locations.

medfateland 2.1.0

  • SERGHEI coupling
  • Raster topology from terra package required in watershed simulations
  • Parallel computation enabled for spwb_land (only with SERGHEI)

medfateland 2.0.5

  • Seed production and seed bank dynamics (from medfate v.3.2.0)
  • Dispersal process implemented for fordyn_land and fordyn_scenario
  • Fire regime in growth_spatial

medfateland 2.0.3

  • Fire regimes can be simulated in functions fordyn_spatial and fordyn_scenario

medfateland 2.0.2

  • Improvements in fordyn_scenario
  • Allowing management scenarios to specify demand for groups of species
  • Ignoring convex hull checks when calling meteoland interpolation
  • New vignette ‘ManagementScenario’

medfateland 2.0.0

  • IMPORTANT: In this version we removed sp-type S4 classes that were deprecated in 1.0.1. Use release version 1.2.1 to continue using deprecated classes.
  • New function ‘fordyn_land’
  • Compliance with medfate 3.1.1
  • Can accept a list of interpolator objects as weather input

medfateland 1.2.1

  • Compliance with medfate 3.0.0
  • New function ‘initialize_state’

medfateland 1.1.2

  • Package ‘cli’ adopted for client interface
  • Soil water balance in agricultural soils

medfateland 1.1.1

  • Compliance with medfate 2.9.0
  • Allowing the use of an input state in fordyn_spatial simulations
  • Simulation errors, when occurring, are now stored in ‘result’

medfateland 1.1.0

  • New function ‘fordyn_scenario’
  • Allowing for a column called ‘meteo’ in input ‘sf’ objects

medfateland 1.0.1

  • Adapting to new meteoland interpolation procedure

medfateland 1.0.0

  • Major restructuring to work with ‘sf’ instead of ‘sp’

medfateland 0.5.0

  • Reduction of package functions to ‘spatial’ functions
  • Moving documentation to Roxygen

medfateland 0.4.3

  • Compliance with medfate ‘2.7.6’

medfateland 0.4.2

  • Compliance with medfate ‘2.6.2’

medfateland 0.4.1

  • Bug correction in modelspatial during coordinate checking
  • Welcome sentence

medfateland 0.4.0

  • New functions ‘spwbpoints_day’, ‘growthpoints_day’,…
  • New function ‘updateState’

medfateland 0.3.0

  • Function ‘wswb’ renamed ‘spwbland’
  • New function ‘growthland’ and ‘plot.growthland’
  • New summary functions ‘summary.spwbpoints’….
  • New plotting functions ‘plot.summarypoints’, ‘plot.summarypixels’ and ‘plot.summarygrid’
  • New function ‘shinyplot_land’

medfateland 0.2.5

  • Update medfate 2.2

medfateland 0.2.4

  • Update medfate 2.0

medfateland 0.2.3

  • Parallelization in spwb and growth simulations with Spatial*Landscape objects

medfateland 0.2.2

  • New spatial object definitions
  • New function buildWatershedTopography

medfateland 0.2.1

  • Update for medfate version 0.2.1
  • Revision of runoff
  • Grid simulations with MeteorologyInterpolationData as input
  • Cell state output
  • Outlet cell daily runoff

medfateland 0.2.0

  • SFI extract functions moved from ‘medfate’

medfateland 0.1.0

  • Corrections to energy balance for z
  • Package creation from files previously in package ‘medfate’.
  • Linking to package ‘medfate’