Package index • medfateland

Input preparation

Functions to help preparing spatial inputs

add_topography() add_land_cover(): Add topography and land cover

check_topography() check_land_cover() check_forests() check_soils(): Check spatial inputs

add_forests(): Add forests

impute_forests() modify_forest_structure(): Landscape forest parametrization

parse_forestable(): Parse forestable

add_soilgrids() modify_soils(): Landscape soil parametrization

optimization_rock(): Rock optimization

Example data

Example data sets for distributed stands and watershed

example_ifn: Example of distributed forest inventory stands

example_watershed example_watershed_burnin: Example of watershed

Summary/extract functions for spatial classes

Forest and soil summary functions for spatial classes

landscape_summary(): Forest and soil summaries over space

extract_variables() plot_variable(): Landscape variables

Default parameters

Defaults for model inputs

default_dispersal_control(): Default control parameters for dispersal

default_watershed_control(): Default control parameters for watershed processes

default_volume_function(): Default volume function

create_management_scenario(): Create management scenario

create_fire_regime(): Create fire regime

fire_regime_instance(): Fire regime instance

defaultPrescriptionsBySpecies: Default prescriptions by species

Simulation

Simulation model functions

spwb_land() growth_land() fordyn_land() summary(<spwb_land>) summary(<growth_land>): Watershed simulations

spwb_land_day() growth_land_day(): One-day watershed simulations

spwb_spatial() growth_spatial() fordyn_spatial(): Simulations for spatially-distributed forest stands

spwb_spatial_day() growth_spatial_day(): One-day simulation for spatially-distributed forest stands

fordyn_scenario(): Scenario of forest dynamics

update_landscape(): Updates the state of a landscape object

initialize_landscape(): Initialization of model inputs for spatially-distributed forest stands

overland_routing() cell_neighbors(): Overland routing for TETIS sub-model

dispersal(): Seed production, dispersal and seed bank dynamics

Post-processing

Plot and summary functions for simulation results

plot(<spwb_land>) plot(<growth_land>) plot(<fordyn_land>): Displays watershed-level simulation results

plot_summary(): Displays spatial simulation summaries

simulation_summary(): Summarizes spatial simulation results

shinyplot(<sf>): Shiny app with interactive plots and maps

shinyplot(<spwb_land>) shinyplot(<growth_land>) shinyplot(<fordyn_land>): Shiny app with interactive plots and maps of watershed simulation results